Publications

2023

  1. Avelino J., Gagliardi S., Perfecto I., Isaac M.E., Liebig T., Vandermeer J., Merle I., Hajian-Forooshani Z., Motisi N. Tree effects on coffee leaf rust at field and landscape scales. Plant Disease, 107 (2) : p. 247-261. https://doi.org/10.1094/PDIS-08-21-1804-FE
  2. Brown D., de Bruin S., De Sousa K., Abadie C., Carpentier S.C., Machida L., Van Etten J.. 2023. Rank-based data synthesis of heterogeneous trials to identify the effects of climatic factors on the reaction of Musa genotypes to black leaf streak disease. Agronomy Journal, 115 (6) : p. 2990-3009. https://doi.org/10.1002/agj2.21436
  3. de Araújo W.A., Degrande P.E., Malaquias J.B., Silvie P., Nascimento Scoton A.M., da Silva Pachú J.K. Cut off behavior of Spodoptera frugiperda (Smith, 1797) (Lepidoptera: Noctuidae) in Soybean (Glycine max (L.) Merrill) seedlings. Brazilian Archives of Biology and Technology, 66 : 8 p. https://doi.org/10.1590/1678-4324-2023220386
  4. Gagliardi S., Avelino J., Fulthorpe R., de Melo Virginio Filho E., Isaac M.E. No evidence of foliar disease impact on crop root functional strategies and soil microbial communities: what does this mean for organic coffee?. Oikos, 2023 (1) : 12 p. https://doi.org/10.1111/oik.08987
  5. Gagliardi S., Avelino J., Martin A.R., Cadotte M.W., de Melo Virginio Filho E., Isaac M.E. Leaf functional traits and pathogens: Linking coffee leaf rust with intraspecific trait variation in diversified agroecosystems. PloS One, 18 (4) : 16 p. https://doi.org/10.1371/journal.pone.0284203
  6. Gilabert A., Rieux A., Robert S., Vitalis R., Zapater M.F., Abadie C., Carlier J., Ravigné V. Revisiting the historical scenario of a disease dissemination using genetic data and Approximate Bayesian Computation methodology: The case of Pseudocercospora fijiensis invasion in Africa. Ecology and Evolution, 13 (4) : 17 p. https://doi.org/10.1002/ece3.10013
  7. González C., Ballesteros-Mejia L., Díaz-Díaz J., Toro-Vargas D.M., Amarillo-Suarez A.R., Gey D., Léon C., Tovar E., Arias M., Rivera N., Buitrago L.S., Pinto-Moraes R.H., Sano Martins I.S., Decaëns T., González M.A., Kitching I.J., Rougerie R. Deadly and venomous Lonomia caterpillars are more than the two usual suspects. PLoS Neglected Tropical Diseases, 17 (2) : 20 p. https://doi.org/10.1371/journal.pntd.0011063
  8. Kobenan K.C., Kouadio I.S., Kouakou M., Silvie P., Bini K.K.N., N'Goran K.E., Kouakou B.J., Amangoua N.F., Tehia K.E., Uba A.I., Zengin G. In vitro and molecular docking evaluation of larvicidal effects of essential oils of five aromatic plants on the fall armyworm Spodoptera frugiperda JE Smith (Lepidoptera:Noctuidae) from Ivory Coast. Chemistry and Biodiversity, 20 (8) : 14 p. https://doi.org/10.1002/cbdv.202300411
  9. Mukundamago M., Dube T., Mudereri B.T., Babin R., Lattorff H.M.G., Tonnang H.E.Z. Understanding climate change effects on the potential distribution of an important pollinator species, Ceratina moerenhouti (Apidae: Ceratinini), in the Eastern Afromontane biodiversity hotspot, Kenya. Physics and Chemistry of the Earth, 130 : 14 p. http://doi.org/10.1016/j.pce.2023.103387s
  10. Savary S., Global Plant Health Assessment Project, et al. A global assessment of the state of plant health. Plant Disease, 107 : p. 3649-3665. https://doi.org/10.1094/PDIS-01-23-0166-FE
  11.  Seye D., Silvie P., Brévault T. Effect of maize seed treatment on oviposition preference, larval performance and foliar damage on the fall armyworm. Journal of Applied Entomology, 147 (5) : p. 299-306. https://doi.org/10.1111/jen.13114

2022

  1. Azrag A.G.A., Babin R. Integrating temperature-dependent development and reproduction models for predicting population growth of the coffee berry borer, Hypothenemus hampei Ferrari. Bulletin of Entomological Research, 113 (1) : p. 79-85. https://doi.org/10.1017/S0007485322000293
  2. Dufour B.P., Diman C., De San Mateo A., Mouttet R. Le scolyte des fruits du caféier, Hypothenemus hampei (Ferr.) détecté en Guadeloupe. Cahiers Agricultures, 31 : 6 p. https://doi.org/10.1051/cagri/2022008
  3. Dumartinet T., Ravel S., Roussel V., Perez-Vicente L., Aguayo J., Abadie C., Carlier J. Complex adaptive architecture of quantitative resistance erosion in a plant fungal pathogen. Molecular Ecology, 31 (4) : p. 1160-1179. https://doi.org/10.5061/dryad.80gb5mknf https://doi.org/10.5061/dryad.rxwdbrv8r https://doi.org/10.1111/mec.16297
  4. Dupont S., Irvine M.R., Motisi N., Allinne C., Avelino J., Bagny-Beilhe L. Wind-flow dynamics and spore-like particle dispersal over agroforestry systems: Impact of the tree density distribution. Agricultural and Forest Meteorology, 327 : 20 p. https://doi.org/10.1016/j.agrformet.2022.109214
  5. Jay P., Leroy M., Le Poul Y., Whibley A., Arias M., Chouteau M., Joron M. Association mapping of colour variation in a butterfly provides evidence that a supergene locks together a cluster of adaptive loci. Philosophical Transactions - Royal Society. Biological Sciences, 377 (1856) (dossier Genomic architecture of supergenes: causes and evolutionary consequences) : 14 p. https://doi.org/10.1098/rstb.2021.0193
  6. Kam K.W., Ilboudo Z., Silvie P., Sanon A. Synergistic control of Callosobruchus maculatus Fab. (Coleoptera: Chrysomelidae) by releases of an oophagous and a larval parasitoid in experimental cowpea storage systems. Journal of Plant Diseases and Protection, 129 : p. 347-365. https://doi.org/10.1007/s41348-022-00576-w
  7. Merle I., Villarreyna Acuna R.A., Ribeyre F., Roupsard O., Cilas C., Avelino J. Microclimate estimation under different coffee-based agroforestry systems using full-sun weather data and shade tree characteristics. European Journal of Agronomy, 132 : 13 p. https://doi.org/10.1016/j.eja.2021.126396
  8. Motisi N., Bommel P., Leclerc G., Robin M.H., Aubertot J.N., Arias Butron A., Merle I., Treminio E., Avelino J. Improved forecasting of coffee leaf rust by qualitative modeling: Design and expert validation of the ExpeRoya model. Agricultural Systems, 197 : 26 p. https://doi.org/10.1016/j.agsy.2021.103352
  9. Motisi N., Papaïx J., Poggi S. The dark side of shade: How microclimates drive the epidemiological mechanisms of coffee berry disease. Phytopathology, 112 (6) : p. 1235-1243. https://doi.org/10.18167/DVN1/KP76RE https://doi.org/10.1094/PHYTO-06-21-0247-R
  10. Vilchez Mendoza S.J., Romero-Gurdián A., Avelino J., DeClerck F., Bommel P., Betbeder J., Cilas C., Bagny-Beilhe L. Assessing the joint effects of landscape, farm features and crop management practices on berry damage in coffee plantations. Agriculture, Ecosystems and Environment, 330. https://doi.org/10.1016/j.agee.2022.107903
  11. Yainna Kumarihami S., Tay W.T., Durand K., Fiteni E., Hilliou F., Legeai F., Clamens A.L., Gimenez S., Asokan R., Kalleshwaraswamy C.M., Deshmukh S.S., Meagher Jr. R.L., Blanco C.A., Silvie P., Brévault T., Dassou G.A., Kergoat G.J., Walsh T., Gordon K.H.J., Nègre N., D'Alençon E., Nam K. The evolutionary process of invasion in the fall armyworm (Spodoptera frugiperda). Scientific Reports, 12 : 11 p. https://doi.org/10.1038/s41598-022-25529-z

2021

  1. Carlier J., Bonnot F., Roussel V., Ravel S., Martinez R.T., Perez-Vicente L., Abadie C., Wright S. Convergent adaptation to quantitative host resistance in a major plant pathogen. Mbio, 12 (1) : 18 p. https://doi.org/10.1128/mBio.03129-20
  2. Carlier J., Robert S., Roussel V., Chilin-Charles Y., Lubin Adjanoh N., Gilabert A., Abadie C. Central American and Caribbean population history of the Pseudocercospora fijiensis fungus responsible for the latest worldwide pandemics on banana. Fungal Genetics and Biology, 148 : 10 p. https://doi.org/10.1016/j.fgb.2021.103528
  3. Dassou G.A., Idohou R., Azandémè-Hounmalon Y.G., Sabi-Sabi A., Houndété J., Silvie P., Dansi A. Fall armyworm, Spodoptera frugiperda (J.E. Smith) in maize cropping systems in Benin: Abundance, damage, predatory ants and potential control. International Journal of Tropical Insect Science, 41 : p. 2627-2636. https://doi.org/10.1007/s42690-021-00443-5
  4. Dufour B.P., Kerana I.W., Ribeyre F. Population dynamics of Hypothenemus hampei (Ferrari) according to the phenology of Coffea arabica L. in equatorial conditions of North Sumatra. Crop Protection, 146 : 9 p.
  5. Gagliardi S., Avelino J., de Melo Virginio Filho E., Isaac M.E. Shade tree traits and microclimate modifications: Implications for pathogen management in biodiverse coffee agroforests. Biotropica, 53 (5) : p. 1356-1367. https://doi.org/10.5061/dryad.zcrjdfnbw https://doi.org/10.1111/btp.12984
  6. Gruel G., Diouf M.B., Abadie C., Chilin-Charles Y., Etter E., Geffroy M., Herrmann Storck C., Meyer D., Pagès N., Pressat G., Teycheney P.Y., Umber M., Vega-Rúa A., Pradel J. Critical evaluation of cross-sectoral collaborations to inform the implementation of the "One Health" approach in Guadeloupe. Frontiers in Public Health, 9 : 13 p. https://doi.org/10.3389/fpubh.2021.652079
  7. Lasso E., Motisi N., Avelino J., Corrales J.C. FramePests: A comprehensive framework for crop pests modeling and forecasting. IEEE Access, 9 : p. 115579-115598. https://doi.org/10.1109/ACCESS.2021.3104537
  8. Mahob R.J., Ngah I.M., Feumba R.D., Mahot H.C., Bassogog C.B.B., Bilong C.F.B., Ebouel F.E., Etam P.B.N., Taliedje D.M., Hanna R., Babin R. Secondary metabolite effects of different cocoa genotypes on feeding preference of the mirid Sahlbergella singularis Hagl. Arthropod-Plant Interactions, 15 (5) : p. 821-831. https://doi.org/10.1007/s11829-021-09857-x
  9. Mondedji A.D., Silvie P., Nyamador W.S., Martin P., Agboyi L.K., Amévoin K., Ketoh G.K., Glitho I.A. Cabbage production in West Africa and IPM with a focus on plant-based extracts and a complementary worldwide vision. Plants, 10 (3) (n.spéc. Natural Products for Plant Pest and Disease Control) : 36 p. https://doi.org/10.3390/plants10030529
  10. Mosomtai G., Azrag A.G.A., Babin R., Abdel-Rahman E.M., Odindi J., Mutanga O., Tonnang H.E.Z., Landmann T., David G. Functional land cover scale for three insect pests with contrasting dispersal strategies in a fragmented coffee-based landscape in Central Kenya. Agriculture, Ecosystems and Environment, 319 : 10 p. https://doi.org/10.1016/j.agee.2021.107558
  11. Ndoungue Djeumekop M.M., Ngo Bieng M.A., Ribeyre F., Bonnot F., Cilas C., Neema C., Ten Hoopen G.M. Spatial and temporal analysis of Phytophthora megakarya epidemic in newly established cacao plantations. Plant Disease, 105 (5) : p. 1448-1460. https://doi.org/10.1094/PDIS-09-19-2024-RE
  12. Nembot Fomba C.G., Ten Hoopen G.M., Soubeyran S., Roques L., Ambang Z., Soh T. Parameter estimation in a PDE model for the spatial spread of cocoa black pod disease. Bulletin of Mathematical Biology, 83 : 28 p. https://doi.org/10.1007/s11538-021-00934-z
  13. Ratnadass A., Avelino J., Fernandes P., Letourmy P., Babin R., Deberdt P., Deguine J.P., Grechi I., Naudin K., Rhino B., DeClerck F., Kadi Kadi H.A., Mahob R., Rabary B., Rafarasoa L.S., Lescourret F., Van Den Berg J. Synergies and tradeoffs in natural regulation of crop pests and diseases under plant species diversification. Crop Protection, 146 : 15 p. https://doi.org/10.1016/j.cropro.2021.105658
  14. Rhiney K., Guido Z., Knudson C., Avelino J., Bacon C.M., Leclerc G., Aime M.C., Bebber D.P. Epidemics and the future of coffee production. Proceedings of the National Academy of Sciences of the United States of America, 118 (27) : 10 p. https://doi.org/10.1073/pnas.2023212118
  15. Silvie P., Martin P., Huchard M., Keip P., Gutierrez A., Sarter S. Prototyping a knowledge-based system to identify botanical extracts for plant health in Sub-Saharan Africa. Plants, 10 (5) : 24 p. https://doi.org/10.3390/plants10050896
  16. Yainna Kumarihami S., Nègre N., Silvie P., Brévault T., Tay W.T., Gordon K.H.J., D'Alençon E., Walsh T., Nam K. Geographic monitoring of insecticide resistance mutations in native and invasive populations of the fall armyworm. Insects, 12 (5) (n.spéc. Recent Advances in the Understanding of Molecular Mechanisms of Resistance in Noctuid Pests) : 12 p. https://doi.org/10.3390/insects12050468